BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039F02SP1|AL430729
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig800 1725 0.0
>3x_Contig800
Length = 3612
Score = 1725 bits (869), Expect = 0.0
Identities = 889/895 (99%), Gaps = 3/895 (0%)
Strand = Plus / Plus
Query: 1 aggacgnatcttgtttgttcgaaatgtgaaaatcagaaaaatgaaatttgaaatttaaaa 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2499 aggacgaatcttgtttgttcgaaatgtgaaaatcagaaaaatgaaatttgaaatttaaaa 2558
Query: 61 ttcgaaagtttgaaacgggtttagttagtcatctcacttattgcacttggaaagatcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2559 ttcgaaagtttgaaacgggtttagttagtcatctcacttattgcacttggaaagatcgcc 2618
Query: 121 tgahagtgtggagcattgtgtcttttgtattggtttggtcaggtcttattgacaagatac 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2619 tgaaagtgtggagcattgtgtcttttgtattggtttggtcaggtcttattgacaagatac 2678
Query: 181 tgacaaaataaactttggagggtgtgcacggatttggaagagtactagccagatttgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2679 tgacaaaataaactttggagggtgtgcacggatttggaagagtactagccagatttgaag 2738
Query: 241 aaaggttgaggagccgctgtatgaacaatcaattttttttttttgttttcctaagcatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2739 aaaggttgaggagccgctgtatgaacaatcaattttttttttttgttttcctaagcatct 2798
Query: 301 atctattgatttctttttcctcagaattcagcctgttctgtcttttgataaaaacataac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2799 atctattgatttctttttcctcagaattcagcctgttctgtcttttgataaaaacataac 2858
Query: 361 gtgttaaaamattacctttgaaccagtaaaaaggattaacgttatccgttcatcgtatcc 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2859 gtgttaaaaaattacctttgaaccagtaaaaaggattaacgttatccgttcatcgtatcc 2918
Query: 421 actactggttttattttctgtgtgctatatccctttgtaccggtgtatttgtgaagtttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2919 actactggttttattttctgtgtgctatatccctttgtaccggtgtatttgtgaagtttc 2978
Query: 481 cattcaaacaacctagctcactagcttatagttttgtcagatactacaacattttgaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2979 cattcaaacaacctagctcactagcttatagttttgtcagatactacaacattttgaagc 3038
Query: 541 agatagatacagatttatttcgatggtcgagaagaaagattcagctggccggtttaatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3039 agatagatacagatttatttcgatggtcgagaagaaagattcagctggccggtttaatgg 3098
Query: 601 acaaccgagccatggcgggccgaggtttattaggacgctgggctcgcagtcattaagtgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3099 acaaccgagccatggcgggccgaggtttattaggacgctgggctcgcagtcattaagtgg 3158
Query: 661 tctgaatcctttatccaatgcgcacaa--ggggtttctcagcaacaacaacacctaagcc 718
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3159 tctgaatcctttatccaatgcgcacaagtggggtttctcagcaacaacaacacctaagcc 3218
Query: 719 atcattctcataacgttacagactcagactctcccagtattcaagattcc-gggattcct 777
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3219 atcattctcataacgttacagactcagactctcccagtattcaagattccggggattcct 3278
Query: 778 atcacatccgctttgatcaagaaggagtcacctagtcatgcggtttctggtataccgtct 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3279 atcacatccgctttgatcaagaaggagtcacctagtcatgcggtttctggtataccgtct 3338
Query: 838 aactcaaacagtattaataacaatagtaaaagcaattccaataataatccatcca 892
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3339 aactcaaacagtattaataacaatagtaaaagcaattccaataataatccatcca 3393
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,320
Number of Sequences: 1807
Number of extensions: 14320
Number of successful extensions: 191
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)